Some bacteria can act as catalysts to oxidize (or reduce) organic or inorganic matter with the potential of generating electrical current. Despite their high value for sustainable energy, organic compound production and bioremediation, a tool to probe the natural biodiversity and to select most efficient microbes is still lacking. Compartmentalized cell culture is an ideal strategy for achieving such a goal but the appropriate compartment allowing cell growth and electron exchange must be tailored. Here, we develop a conductive composite hydrogel made of a double network of alginate and carbon nanotubes. Homogeneous mixing of carbon nanotubes within the polyelectrolyte is obtained by a surfactant assisted dispersion followed by a desorption step for triggering electrical conductivity. Dripping the mixture in a gelling bath through simple extrusion or a double one allows the formation of either plain hydrogel beads or liquid core hydrogel capsules. The process is shown to be compatible with the bacterial culture (Geobacter sulfurreducens). Bacteria can indeed colonize the outer wall of plain beads or the inner wall of the conductive capsules’ shell that function as an anode from which electrons produced by the cells are collected.

Ce travail de thèse est principalement axé sur la création d’un nouveau réacteur biocompatible permettant l’encapsulation et l’étude de bactéries électroactives. Ce compartiment de taille millimétrique, réalisé par coextrusion, est une capsule à cœur liquide possédant une membrane d’hydrogel conducteur. La synthèse de ce bioréacteur a nécessité la formulation d’un hydrogel composite alginate/nanotubes de carbone en deux étapes. Une première étape rapide crée la matrice d’hydrogel par diffusion d’ions divalents dans un mélange Alginate/nanotubes de carbone. Une seconde étape, plus lente, permet la dialyse du tensioactif stabilisant les nanotubes et la création d’un réseau conducteur au sein de l’hydrogel pour des pourcentages massiques de charges supérieurs à 0,5 %. Ce matériau composite présente alors une conductivité macroscopique d’environ 0,1 S.m^-1. Une étude du matériau par voie électrochimique permet entre autres de suivre cinétiquement la connexion des nanotubes de carbone. Des bactéries peuvent adhérer à la surface de cet hydrogel composite. Nous démontrons qu’il est alors possible de mesurer l’électroactivité d’un biofilm bactérien développé sur la paroi interne d’une capsule conductrice. Ce nouveau compartiment biocompatible ouvre la voie vers le développement d’un outil de criblage pour la sélection de bactéries électroactives mais offre également des perspectives innovantes pour la fabrication de piles bactériennes.

The local functionalities of biocompatible objects can be characterized under conditions similar to their operating ones by scanning electrochemical microscopy (SECM). In the case of alginate beads entrapping carbon nanotubes (CNTs), SECM allows evidencing the local conductivity, the organization, and the communication between CNTs. It shows that the CNTs network is active enough to allow long range charge evacuation, enabling the use of alginate/CNT beads as soft 3D electrodes. Direct connection or local interrogation by microelectrodes allows visualizing their communication as a network and eventually studying them individually at the nanoscale.

Capsules having a thin alginate hydrogel membrane and an aqueous core can be obtained by a process that involves a co-extrusion step in air followed by a sol–gel transition of the shell after immersion into a gelling bath. The possibility to encapsulate cells that further grow in these biocompatible compartments, and thus offer a versatile tool for cell culture, led us to investigate the physicochemical properties of the capsules. A cut-off pore size of the semi-permeable membrane is extrapolated from the release of polymers out of the capsule. When polymers cannot diffuse through the membrane, the osmotic pressure mismatch between the core and the surrounding medium triggers an inflation of the capsule. The swelling may reach a steady state that allows the determination of the elastic features of the hydrogel shell. On the other hand, the capsule membrane may rupture and then contract. From this stress-relaxation process, a critical deformation of the hydrogel shell above which plasticity occurs can be deduced. Finally, thanks to the physical nature of the hydrogel, the core content can be released by dissolving the membrane with the help of small electrolytes. The shell life is shown to vary inversely with the ionic strength of the solution.

Deciphering the multifactorial determinants of tumor progression requires standardized high-throughput preparation of 3D in vitro cellular assays. We present a simple microfluidic method based on the encapsulation and growth of cells inside permeable, elastic, hollow microspheres. We show that this approach enables mass production of size-controlled multicellular spheroids. Due to their geometry and elasticity, these microcapsules can uniquely serve as quantitative mechanical sensors to measure the pressure exerted by the expanding spheroid. By monitoring the growth of individual encapsulated spheroids after confluence, we dissect the dynamics of pressure buildup toward a steady-state value, consistent with the concept of homeostatic pressure. In turn, these confining conditions are observed to increase the cellular density and affect the cellular organization of the spheroid. Postconfluent spheroids exhibit a necrotic core cemented by a blend of extracellular material and surrounded by a rim of proliferating hypermotile cells. By performing invasion assays in a collagen matrix, we report that peripheral cells readily escape preconfined spheroids and cell–cell cohesivity is maintained for freely growing spheroids, suggesting that mechanical cues from the surrounding microenvironment may trigger cell invasion from a growing tumor. Overall, our technology offers a unique avenue to produce in vitro cell-based assays useful for developing new anticancer therapies and to investigate the interplay between mechanics and growth in tumor evolution.

Ce travail de thèse concerne l'étude des propriétés physico-chimiques de capsules millimétriques à cœur liquide possédant une membrane fine d'hydrogel d'alginate.
Nous avons dans un premier temps caractérisé le transport de molécules à travers la coque d'hydrogel et estimé le rayon de coupure de cette membrane semi-perméable. De plus, il est possible de limiter la fuite de petits solutés hydrophiles en ajoutant une couche hydrophobe entre le cœur aqueux et la membrane d'alginate. Nous démontrons alors que le temps caractéristique de fuite est déterminé par la géométrie du système (épaisseur de la couche hydrophobe et rayon de la capsule) ainsi que la solubilité et le coefficient de diffusion du soluté dans la phase huileuse.
D'autre part, le gonflement d'une capsule soumise à une différence de pression osmotique nous a permis d'identifier les régimes viscoélastique et viscoplastique de la membrane sous étirement. Nous en déduisons un module élastique de l'hydrogel, qui diminue au-delà du seuil de plasticité. A contrario, lors de la compression de capsules, l'hydrogel est concentré par expulsion irréversible de l'eau, ce qui entraîne une rigidification de sa structure.
Enfin, nous nous sommes intéressés à l'écoulement d'une suspension concentrée de capsules à coeur huileux dans l'eau. Il existe une friction entre les capsules qu'il est possible de contrôler par ajout de tensioactif. Nous avons donc étudié son rôle dans l'écoulement de capsules dans une constriction de type sablier. Ainsi, nous démontrons que le flux est constant et qu'il ne dépend pas de la friction, mais qu'il est fixé par la taille de l'étranglement. En effet, l'écoulement est uniquement déterminé par l'hydrodynamique en phase fluide dans le col du sablier.

Lipid nanoparticles, based on nanoemulsion templates, are interesting candidates for contrast agent and active ingredient transport and delivery due to their small size, biodegradable nature and high versatility. An optimized nanosystem for drug delivery should present an important encapsulation ratio, as well as controlled release kinetics. In this context, the influence of the lipid nanoparticle core composition on the encapsulation and release behavior of the Nile Red fluorophore, used as a model molecule of intermediate lipophilicity, is explored. For that purpose, the lipid nanoparticle physical state, the encapsulated molecule localization, and the encapsulation/release behavior are studied. Careful characterization of lipid nanoparticles is performed by DSC and 1H NMR analysis.Nile Red localization is evaluated by complementary fluorescence spectroscopy and 1H NMR techniques. The encapsulation of Nile Red is governed and limited by its solubility in the lipids. A double localization of the fluorophore at the membrane and in the particle core is observed, resulting in a two-phase release kinetics: a quick burst release, followed by a slow prolonged release. Adding wax to the formulation increases the lipid nanoparticle internal viscosity while favoring Nile Red localization in the core, which results in slower release kinetics.

Liquid pearls designate liquid core capsules having a thin elastic shell.

We report an experimental investigation on the formation of liquid-core capsules having a thin hydrogel elastic membrane, named ‘liquid pearls’. These fish-egg-like structures are initially made of a millimetric liquid drop, aqueous or not, coated with an aqueous liquid film containing sodium alginate that gels once the double drop enters a calcium chloride bath. The creation of such pearls with a micrometer-thick membrane requires the suppression of mixing until gelling takes place. Here, we show that superimposing a two-dimensional surfactant precipitation at the interface confers a transient rigidity that can damp the shear-induced instability at impact. Based on this, pearls containing almost any type of liquid can be created. This opens the possibility to use such structures as a new tool for screening microorganism survival and growth in various three-dimensional environments.